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Strain-specific metabolomic diversity of Lactiplantibacillus plantarum underaerobic and anaerobic conditions, Food Microbiology, 116, 104364., Su-Hyun Kim a, Digar Singh a, Seul-Ah Kim b, Min Jeong Kwak b, Donghyun Cho c, Juewon Kim c, Jong-Hwa Roh c, Wan-Gi Kim c, Nam Soo Han b, Choong Hwan Lee a,d,*, (2023).




Characterization and temporal dynamics of the intra- and extracellular environments of Lactiplantibacillus plantarum using​ multi-platform metabolomics​, LWT-FOOD SCIENCE AND TECHNOLOGY, 5(1), 232., Su-Hyun Kim a, Digar Singh a, Su Young Son a, Sunmin Lee a, Dong Ho Suh a, Na-Rae Lee a, Gun-Seok Park b, Jihee Kang b, Choong Hwan Lee a,c,*​. (2023)



Metabolite Profiling and Microbial Community of Traditional Meju Show Primary and Secondary Metabolite Differences Correlated with Antioxidant Activities, JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, 30(11), 1697-1705., Song D.H., Chun, B.H., Lee, S.M., Reddy, C.K., Jeon, C.O., Lee, C.H., (2020).



Comprehensive Metabolite Profiling of Four Different Beans Fermented by Aspergillus oryzae, MOLECULES, 27(22), 7917., Lee, Y.H., Lee, N.R., Lee, C.H., (2022).



Non-obligate pairwise metabolite cross-feeding suggests ammensalic interactions between Bacillus amyloliquefaciens and Aspergillus oryzae, COMMUNICATIONS BIOLOGY, 5(1), 232., 

Singh, D., Lee, S.H., Lee, C.H., (2022). 



Integrated genomic and transcriptomic analysis reveals unique mechanisms for high osmotolerance and halotolerance in Hyphopichia yeast, ENVIRONMENTAL MICROBIOLOGY, 23(7), 3499-3522., Lee, D. W., Hong, C. P., Thak, E. J., Park, S. G., Lee, C. H., Lim, J. Y., Seo, J . A.,  Kang, H. A., (2021).



Longitudinal evaluation of fecal microbiota transplantation for ameliorating calf diarrhea and improving growth performance, NATURE COMMUNICATIONS, 12(1), 161., Kim, H. S., Whon, T. W.,Sung, H. J., Jeong, Y. S., Jung, E. S., Shin, N. R., Hyun, D. W., Kim, P. S., Lee, J. Y., Lee, C. H.,Bae, J. W., (2021). 

http://www.Longitudinal evaluation of fecal microbiota transplantation for ameliorating calf diarrhea and improving growth performance | Nature Communications   

Male castration increases adiposity via small intestinal microbial alterations, EMBO REPORTS, 22(1), e50663., Whon, T.W., Kim, H. S., Shin, N. R., Jung, E. S., Tak, E. J., Sung, H. J., Jung, M. J., Jeong, Y. S.,Hyun, D.W., Kim, P. S., Jang, Y. K., Lee, C. H., Bae, J. W.(2021).

Characterization of Metabolic Changes under Low Mineral Supply (N, K, or Mg) and Supplemental LED Lighting (Red, Blue, or Red-Blue Combination) in Perilla frutescens Using a Metabolomics Approach, MOLECULES, 25(20), 4714.,  Suh, D. H., Kim, Y. X., Jung, E. S., Lee, S. B., Park, J. Y., Lee, C. H., Sung, J. K. (2020).  


Critical thresholds of 1-Octen-3-ol shape inter-species Aspergillus interactions modulating the growth and secondary metabolism, Scientific Reports, 10(1), 11116., Singh, D., Son, S. Y., Lee, C. H. (2020). 

Genome-Scale Metabolic Network Reconstruction and In Silico Analysis of Hexanoic acid Producing Megasphaera elsdenii, Microorganisms, 8(4), 539., Lee, N. R., Lee, C. H., Lee, D. Y., Park, J. B. (2020). 


Fathoming Aspergillus oryzae metabolomes in formulated growth matrices. CRITICAL REVIEWS IN BIOTECHNOLOGY, 39(1), 35-49. Singh, D., Lee, S. M., Lee, C. H. (2019). 



Non-targeted metabolomics unravels a media-dependent prodiginines production pathway in Streptomyces. PLoS One, 13(11), e0207541. Lim, Y. H., Jung, E. S., Lee, J. H., Kim, E. J., Hong, S. J., Lee, Y. H., Lee, C. H. (2018).  

Comprehensive Secondary Metabolite Profiling Toward Delineating the Solid and Submerged-state Fermentation of Aspergillus oryzae KCCM 12698. Frontiers in Microbiology, 9, 1076. Son, S. Y., Lee, S. M.,  Singh, D.,  Lee, N. R., Lee, D. Y., Lee, C. H. (2018). 


Volatiles Mediated Interactions Between Aspergillus oryzae Strains Modulate Morphological Transition and Exometabolomes. Frontiers in Microbiology, 9, 628. Singh, D., Lee, C. H. (2018). 


Intraspecies Volatile Interactions Affect Growth Rates and Exometabolomes in Aspergillus oryzae KCCM 60345. JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, 28(2), 199–209. Singh, D., Lee, C. H. (2018). 


Perplexing Metabolomes in Fungal-Insect Trophic Interactions: A Terra Incognita of Mycobiocontrol Mechanisms. Frontiers in Microbiology, 19(7), 1678., Singh, D., Son, S. V., Lee, C. H. (2016). 


Fumarate-Mediated Persistence of Escherichia coli against Antibiotics. Antimicrobial Agents and Chemotherapy, 60(4), 2232-2240. Kim, J. S., Cho, D. H., Heo, P., Jung, S, C., Park, M. S., Oh, E. J., ... & Kweon, D. H. (2016).
Suppressing activity of staurosporine from Streptomyces sp. MJM4426 against rice bacterial blight disease. Journal of Applied Microbiology, 120(4), 975-985. Cheng, J., Park, S. B., Kim, S. H., Yang, S.H., Suh, J. W., Lee, C. H., &  Kim, J. G. (2016).
Metabolomic and Transcriptomic Comparison of Solid-State and Submerged Fermentation of Penicillium expansum KACC 40815. PLoS One, 11(2), e0149012. Kim, H. Y., Heo, D. Y., Park, H. M., Singh, D., & Lee, C. H. (2016).
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